Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs13235168 chr7:6715000 G/T 4.32E-11 484 30.97 27.77 38.33 KM Plot
PRAD rs13235262 chr7:6715038 G/A 4.32E-11 484 30.97 27.77 38.33 KM Plot
PRAD rs13236809 chr7:6777780 T/G 3.64E-5 488 31 30.27 35.28 KM Plot
PRAD rs13236820 chr7:6777820 T/G 3.63E-5 490 31 30.2 35.28 KM Plot
PRAD rs13239072 chr7:43566344 A/G 7.72E-6 486 31.3 30.97 14.4 KM Plot
PRAD rs13239758 chr7:6746098 C/A 3.91E-11 487 31 27.77 38.33 KM Plot
PRAD rs13244762 chr7:6719992 T/A 3.13E-7 492 31.18 26.7 50.03 KM Plot
PRAD rs13246102 chr7:6777821 G/A 3.63E-5 490 31 30.2 35.28 KM Plot
PRAD rs13246317 chr7:6768489 A/G 3.64E-11 485 31.18 28.03 38.33 KM Plot
PRAD rs13253773 chr8:143445030 G/A 1.19E-5 490 30.8 31.65 28.77 KM Plot
PRAD rs13261968 chr8:71544033 G/A 4.84E-7 492 31.18 30.73 24.27 KM Plot
PRAD rs13264967 chr8:143385589 C/T 6.59E-5 482 30.93 32.05 28.13 KM Plot
PRAD rs13266715 chr8:71921095 G/T 4.34E-5 493 31.13 29.97 24.27 KM Plot
PRAD rs13271014 chr8:71529266 C/T 4.98E-7 494 24.27 29.57 31.27 KM Plot
PRAD rs13276058 chr8:71494114 T/G 8.53E-5 485 31.18 30.73 31.3 KM Plot